Heatmap: Cluster_56 (P. berghei)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Asexual: SRP099925
Asexual, PbSR-MG KO: SRP109709
10 hpi, ab libitum: SRP059210
10 hpi, diet restriction: SRP059210
10 hpi, ab libitum, kin KO: SRP059210
10 hpi, diet restriction, kin KO: SRP059210
16 hpi, WT: ERP004868
16 hpi, CL: ERP004868
Trophozoite, 16 hpi: SRP027529
Schizont, predicted: ERP021229
Schizont, WT: SRP073801
Schizont, 22 hpi: SRP027529
Schizont: ERP004598
Schizont, ap2-g KO: SRP073801
Schizont, ap2-g2 KO: SRP073801
Schizont, ap2-l KO: SRP073801
Schizont, ap2-o KO: SRP073801
Schizont, ap2-o2 KO: SRP073801
Schizont, ap2-o3 KO: SRP073801
Schizont, ap2-o4 KO: SRP073801
Schizont, ap2-sp KO: SRP073801
Schizont, ap2-sp2 KO: SRP073801
Schizont, ap2-sp3 KO: SRP073801
Schizont, PBANKA_131970 KO: SRP073801
Schizont, ppm2 KO: ERP004598
Schizont, ppm5 KO: ERP004598
Gametocyte, WT: SRP073801
Gametocyte: SRP027529
Gametocyte: ERP004598
Gametocyte (male): SRP099925
Gametocyte (female): SRP099925
Gametocyte ap2-o KO: SRP073801
Gametocyte ap2-o2 KO: SRP073801
Gametocyte ap2-o3 KO: SRP073801
Gametocyte, ppm5 KO: ERP004598
Gametocyte (male), PbSR-MG KO: SRP109709
Gametocyte (female), PbSR-MG KO: SRP109709
Ookinete, WT: SRP073801
Ookinete, WT: ERP004740
Ookinete ap2-o KO: SRP073801
Ookinete ap2-o2 KO: SRP073801
Ookinete ap2-o3 KO: SRP073801
Ookinete, mutant: ERP004740
2.0 2.08 1.68 1.32 1.21 1.39 -0.17 -1.38 1.31 - -0.52 -1.01 -0.16 -1.91 -1.08 0.19 -1.84 -0.51 -1.05 -0.97 -0.77 -0.31 -0.4 -0.49 -0.02 0.08 -1.41 -1.2 -1.12 0.53 -0.96 -1.64 -0.69 -1.27 -0.21 0.19 -1.27 -1.04 -1.82 -1.12 -0.71 -1.52 -1.48
2.49 2.85 1.75 1.33 1.42 1.23 - -6.7 1.96 - -1.48 -1.02 -0.71 -3.55 -1.83 -0.79 -3.62 -1.71 -2.27 -1.76 -1.49 -0.32 -0.42 -0.85 -1.18 -0.07 -2.02 -1.7 -0.62 0.54 -0.85 -1.75 -1.08 -1.43 -0.3 -0.24 -1.79 -2.2 -6.3 -0.54 -0.91 -1.16 -
1.66 1.96 1.05 1.02 0.8 0.46 -4.31 -4.67 1.44 - 0.34 0.61 0.16 -1.48 -0.09 0.43 -1.34 -0.22 -0.01 -0.06 -0.38 0.55 0.38 0.48 0.16 0.29 -1.79 -1.49 -1.58 0.69 -0.92 -1.36 -0.81 -0.95 -0.87 0.68 -2.38 -2.01 -4.46 -0.48 -0.74 -1.57 -5.21

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.