Heatmap: Cluster_53 (P. berghei)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Asexual: SRP099925
Asexual, PbSR-MG KO: SRP109709
10 hpi, ab libitum: SRP059210
10 hpi, diet restriction: SRP059210
10 hpi, ab libitum, kin KO: SRP059210
10 hpi, diet restriction, kin KO: SRP059210
16 hpi, WT: ERP004868
16 hpi, CL: ERP004868
Trophozoite, 16 hpi: SRP027529
Schizont, predicted: ERP021229
Schizont, WT: SRP073801
Schizont, 22 hpi: SRP027529
Schizont: ERP004598
Schizont, ap2-g KO: SRP073801
Schizont, ap2-g2 KO: SRP073801
Schizont, ap2-l KO: SRP073801
Schizont, ap2-o KO: SRP073801
Schizont, ap2-o2 KO: SRP073801
Schizont, ap2-o3 KO: SRP073801
Schizont, ap2-o4 KO: SRP073801
Schizont, ap2-sp KO: SRP073801
Schizont, ap2-sp2 KO: SRP073801
Schizont, ap2-sp3 KO: SRP073801
Schizont, PBANKA_131970 KO: SRP073801
Schizont, ppm2 KO: ERP004598
Schizont, ppm5 KO: ERP004598
Gametocyte, WT: SRP073801
Gametocyte: SRP027529
Gametocyte: ERP004598
Gametocyte (male): SRP099925
Gametocyte (female): SRP099925
Gametocyte ap2-o KO: SRP073801
Gametocyte ap2-o2 KO: SRP073801
Gametocyte ap2-o3 KO: SRP073801
Gametocyte, ppm5 KO: ERP004598
Gametocyte (male), PbSR-MG KO: SRP109709
Gametocyte (female), PbSR-MG KO: SRP109709
Ookinete, WT: SRP073801
Ookinete, WT: ERP004740
Ookinete ap2-o KO: SRP073801
Ookinete ap2-o2 KO: SRP073801
Ookinete ap2-o3 KO: SRP073801
Ookinete, mutant: ERP004740
-6.49 -6.46 -1.31 -1.26 -1.77 -2.13 -4.09 -1.74 -2.64 - -0.39 -1.1 -2.12 3.46 2.9 -0.29 0.1 2.14 2.19 -0.76 -2.91 0.77 1.24 1.65 -0.43 -2.55 -6.32 -3.85 -5.75 -6.67 -8.87 -4.99 -2.33 -3.56 -5.68 -7.52 -8.94 -3.33 -4.19 -3.29 -0.67 -3.18 -5.44
-4.08 -4.56 -1.02 -0.44 -1.92 -2.21 -3.69 -4.82 -2.83 -5.08 2.23 -0.91 -1.38 3.47 2.7 0.81 -1.34 2.09 -2.46 -2.91 -4.14 0.48 -3.78 1.74 -1.59 -4.06 -0.63 -2.85 -4.17 -2.95 -4.49 -0.58 0.34 -0.48 -4.29 -2.35 -6.36 -1.93 -3.74 -1.48 0.12 -4.84 -5.81

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.