Heatmap: Cluster_50 (P. berghei)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Asexual: SRP099925
Asexual, PbSR-MG KO: SRP109709
10 hpi, ab libitum: SRP059210
10 hpi, diet restriction: SRP059210
10 hpi, ab libitum, kin KO: SRP059210
10 hpi, diet restriction, kin KO: SRP059210
16 hpi, WT: ERP004868
16 hpi, CL: ERP004868
Trophozoite, 16 hpi: SRP027529
Schizont, predicted: ERP021229
Schizont, WT: SRP073801
Schizont, 22 hpi: SRP027529
Schizont: ERP004598
Schizont, ap2-g KO: SRP073801
Schizont, ap2-g2 KO: SRP073801
Schizont, ap2-l KO: SRP073801
Schizont, ap2-o KO: SRP073801
Schizont, ap2-o2 KO: SRP073801
Schizont, ap2-o3 KO: SRP073801
Schizont, ap2-o4 KO: SRP073801
Schizont, ap2-sp KO: SRP073801
Schizont, ap2-sp2 KO: SRP073801
Schizont, ap2-sp3 KO: SRP073801
Schizont, PBANKA_131970 KO: SRP073801
Schizont, ppm2 KO: ERP004598
Schizont, ppm5 KO: ERP004598
Gametocyte, WT: SRP073801
Gametocyte: SRP027529
Gametocyte: ERP004598
Gametocyte (male): SRP099925
Gametocyte (female): SRP099925
Gametocyte ap2-o KO: SRP073801
Gametocyte ap2-o2 KO: SRP073801
Gametocyte ap2-o3 KO: SRP073801
Gametocyte, ppm5 KO: ERP004598
Gametocyte (male), PbSR-MG KO: SRP109709
Gametocyte (female), PbSR-MG KO: SRP109709
Ookinete, WT: SRP073801
Ookinete, WT: ERP004740
Ookinete ap2-o KO: SRP073801
Ookinete ap2-o2 KO: SRP073801
Ookinete ap2-o3 KO: SRP073801
Ookinete, mutant: ERP004740
-0.18 0.05 -4.9 -3.83 2.64 2.36 - -29.75 0.43 - 0.18 0.53 1.59 -5.53 -16.82 -8.49 -7.15 -23.0 -8.65 -14.26 -2.34 -2.53 -4.35 -9.21 2.65 1.65 0.4 -0.23 0.12 -0.63 -0.79 1.4 -0.34 0.42 -1.79 0.11 -1.6 -2.7 -11.03 0.65 -3.72 -4.17 -
0.99 -0.32 0.33 0.73 3.4 4.27 -3.03 -3.77 -2.31 - 0.19 -4.81 -1.76 -8.75 -6.53 -2.8 -6.97 -4.7 0.97 -5.48 -5.43 -5.28 -5.23 -5.33 -5.25 -0.65 -2.2 -5.57 -3.08 -0.3 -2.19 -3.87 -3.45 -3.42 -1.74 -3.05 -6.06 -1.91 -3.77 -3.4 -4.52 -3.07 -6.25
0.46 -0.39 -0.1 0.2 3.09 3.61 -0.47 -0.08 -4.63 - 1.1 -5.22 -1.37 -3.76 -4.09 -4.86 0.02 -4.24 -3.88 -5.68 -6.68 -5.11 -5.84 -5.6 -0.04 0.75 0.27 -4.78 -0.81 -0.05 -1.71 0.41 -2.78 -2.82 -0.26 -2.62 -4.11 -0.12 -1.58 1.17 -3.34 -2.5 -2.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.