Heatmap: Cluster_58 (P. berghei)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Asexual: SRP099925
Asexual, PbSR-MG KO: SRP109709
10 hpi, ab libitum: SRP059210
10 hpi, diet restriction: SRP059210
10 hpi, ab libitum, kin KO: SRP059210
10 hpi, diet restriction, kin KO: SRP059210
16 hpi, WT: ERP004868
16 hpi, CL: ERP004868
Trophozoite, 16 hpi: SRP027529
Schizont, predicted: ERP021229
Schizont, WT: SRP073801
Schizont, 22 hpi: SRP027529
Schizont: ERP004598
Schizont, ap2-g KO: SRP073801
Schizont, ap2-g2 KO: SRP073801
Schizont, ap2-l KO: SRP073801
Schizont, ap2-o KO: SRP073801
Schizont, ap2-o2 KO: SRP073801
Schizont, ap2-o3 KO: SRP073801
Schizont, ap2-o4 KO: SRP073801
Schizont, ap2-sp KO: SRP073801
Schizont, ap2-sp2 KO: SRP073801
Schizont, ap2-sp3 KO: SRP073801
Schizont, PBANKA_131970 KO: SRP073801
Schizont, ppm2 KO: ERP004598
Schizont, ppm5 KO: ERP004598
Gametocyte, WT: SRP073801
Gametocyte: SRP027529
Gametocyte: ERP004598
Gametocyte (male): SRP099925
Gametocyte (female): SRP099925
Gametocyte ap2-o KO: SRP073801
Gametocyte ap2-o2 KO: SRP073801
Gametocyte ap2-o3 KO: SRP073801
Gametocyte, ppm5 KO: ERP004598
Gametocyte (male), PbSR-MG KO: SRP109709
Gametocyte (female), PbSR-MG KO: SRP109709
Ookinete, WT: SRP073801
Ookinete, WT: ERP004740
Ookinete ap2-o KO: SRP073801
Ookinete ap2-o2 KO: SRP073801
Ookinete ap2-o3 KO: SRP073801
Ookinete, mutant: ERP004740
-0.53 -1.08 -0.34 -0.2 1.81 1.63 -2.81 -3.76 -1.34 - 3.17 -4.28 -0.53 -2.35 -3.1 -3.13 -0.71 -4.34 -2.33 -3.4 -4.15 -2.52 -2.8 -2.46 0.63 1.68 0.18 -1.08 -0.59 -0.67 -2.79 0.28 0.89 0.76 1.11 -1.23 -4.33 0.46 -2.82 1.79 -0.52 -1.34 -
-0.02 -0.09 1.16 1.98 0.6 0.88 -1.84 -4.12 1.08 - 3.25 -1.98 0.7 -1.02 -0.2 -1.49 0.06 -1.05 -1.0 -0.23 -1.81 -1.05 -0.56 -1.48 1.31 0.0 -1.83 -0.78 -0.82 -0.23 -3.2 -1.32 -1.1 -2.1 -1.31 -0.98 -3.93 -0.48 -5.5 -0.99 -0.18 0.17 -3.43

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.