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  5. PF3D7_0204600

PF3D7_0204600


Description : No superfamily available. Pfam domain(s): PF03159: XRN 5'-3' exonuclease N-terminus.


Gene families : OG_01_0002335 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0002335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_0204600
Cluster P. falciparum: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
PBANKA_0302400 No alias No superfamily available. Pfam domain(s): PF03159: XRN... 0.06 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
MF GO:0004527 exonuclease activity IEA Interproscan predictions
MF GO:0004527 exonuclease activity IEA PlasmoDB
CC GO:0020011 apicoplast RCA PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004179 obsolete membrane alanyl aminopeptidase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004822 isoleucine-tRNA ligase activity IEP Predicted GO
MF GO:0004825 methionine-tRNA ligase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005093 Rab GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006428 isoleucyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006431 methionyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0008153 para-aminobenzoic acid biosynthetic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016441 posttranscriptional gene silencing IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0017136 NAD-dependent histone deacetylase activity IEP Predicted GO
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predicted GO
BP GO:0018206 peptidyl-methionine modification IEP Predicted GO
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predicted GO
CC GO:0031417 NatC complex IEP Predicted GO
BP GO:0032196 transposition IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0034979 NAD-dependent protein deacetylase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0040029 regulation of gene expression, epigenetic IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0046482 para-aminobenzoic acid metabolic process IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004859 Put_53exo 23 381
PlasmoDB 812639
PlasmoDB PF02_0043
PlasmoDB PFB0205c