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  5. PF3D7_0219500

PF3D7_0219500


Description : SSF55174: No description available, SSF55120: "Pseudouridine synthase, catalytic domain superfamily". Pfam domain(s): PF00849: RNA pseudouridylate synthase, PF01479: S4 domain.


Gene families : OG_01_0003437 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0003437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_0219500
Cluster P. falciparum: Cluster_30


Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan predictions
BP GO:0001522 pseudouridine synthesis IEA PlasmoDB
MF GO:0003723 RNA binding IEA Interproscan predictions
MF GO:0003723 RNA binding IEA PlasmoDB
BP GO:0009451 RNA modification IEA Interproscan predictions
BP GO:0009451 RNA modification IEA PlasmoDB
MF GO:0009982 pseudouridine synthase activity IEA Interproscan predictions
MF GO:0009982 pseudouridine synthase activity IEA PlasmoDB
MF GO:0016866 intramolecular transferase activity IEA PlasmoDB
CC GO:0020011 apicoplast RCA PlasmoDB
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Type GO Term Name Evidence Source
CC GO:0000315 organellar large ribosomal subunit IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005762 mitochondrial large ribosomal subunit IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluD 119 295
IPR002942 S4_RNA-bd 47 89
PlasmoDB 812778
PlasmoDB PF02_0182
PlasmoDB PFB0890c