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Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF00076: "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)".
Gene families : OG_01_0000953 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000953_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pfa RNA-seq: PF3D7_0319500 | |
| Cluster | P. falciparum: Cluster_30 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan predictions |
| MF | GO:0003676 | nucleic acid binding | IEA | PlasmoDB |
| MF | GO:0003723 | RNA binding | ISS | PlasmoDB |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
| BP | GO:0001817 | regulation of cytokine production | IEP | Predicted GO |
| BP | GO:0001819 | positive regulation of cytokine production | IEP | Predicted GO |
| MF | GO:0005201 | extracellular matrix structural constituent | IEP | Predicted GO |
| MF | GO:0005484 | SNAP receptor activity | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| BP | GO:0006405 | RNA export from nucleus | IEP | Predicted GO |
| BP | GO:0006606 | protein import into nucleus | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| MF | GO:0008301 | DNA binding, bending | IEP | Predicted GO |
| MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
| CC | GO:0016282 | eukaryotic 43S preinitiation complex | IEP | Predicted GO |
| MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
| BP | GO:0017038 | protein import | IEP | Predicted GO |
| CC | GO:0031201 | SNARE complex | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| BP | GO:0034504 | protein localization to nucleus | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| BP | GO:0048518 | positive regulation of biological process | IEP | Predicted GO |
| BP | GO:0050657 | nucleic acid transport | IEP | Predicted GO |
| BP | GO:0050658 | RNA transport | IEP | Predicted GO |
| MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
| BP | GO:0051168 | nuclear export | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051170 | import into nucleus | IEP | Predicted GO |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predicted GO |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Predicted GO |
| BP | GO:0051240 | positive regulation of multicellular organismal process | IEP | Predicted GO |
| CC | GO:0070993 | translation preinitiation complex | IEP | Predicted GO |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 38 | 107 |