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  5. PF3D7_0728900

PF3D7_0728900


Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF00076: "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)".


Gene families : OG_01_0000534 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_0728900
Cluster P. falciparum: Cluster_15


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0000339 RNA cap binding IEP Predicted GO
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0000492 box C/D snoRNP assembly IEP Predicted GO
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004301 epoxide hydrolase activity IEP Predicted GO
MF GO:0004407 histone deacetylase activity IEP Predicted GO
MF GO:0004529 exodeoxyribonuclease activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
CC GO:0005871 kinesin complex IEP Predicted GO
CC GO:0005874 microtubule IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006379 mRNA cleavage IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0007166 cell surface receptor signaling pathway IEP Predicted GO
BP GO:0007219 Notch signaling pathway IEP Predicted GO
BP GO:0007276 gamete generation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008296 3'-5'-exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008310 single-stranded DNA 3'-5' exodeoxyribonuclease activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016281 eukaryotic translation initiation factor 4F complex IEP Predicted GO
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Predicted GO
MF GO:0016803 ether hydrolase activity IEP Predicted GO
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019213 deacetylase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030507 spectrin binding IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
MF GO:0033558 protein deacetylase activity IEP Predicted GO
CC GO:0035770 ribonucleoprotein granule IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predicted GO
CC GO:0042575 DNA polymerase complex IEP Predicted GO
CC GO:0043186 P granule IEP Predicted GO
CC GO:0043625 delta DNA polymerase complex IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044538 host cell periphery IEP Predicted GO
CC GO:0044613 nuclear pore central transport channel IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0048609 multicellular organismal reproductive process IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
CC GO:0097255 R2TP complex IEP Predicted GO
CC GO:0099080 supramolecular complex IEP Predicted GO
CC GO:0099081 supramolecular polymer IEP Predicted GO
CC GO:0099512 supramolecular fiber IEP Predicted GO
CC GO:0099513 polymeric cytoskeletal fiber IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 208 284
PlasmoDB 9221874
PlasmoDB MAL7P1.157a