Aliases : SNRPC
Description : SSF57667: Zinc finger C2H2 superfamily. Pfam domain(s): PF06220: U1 zinc finger.
Gene families : OG_01_0002100 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0002100_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pfa RNA-seq: PF3D7_0812700 | |
Cluster | P. falciparum: Cluster_11 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | ISS | PlasmoDB |
MF | GO:0003676 | nucleic acid binding | IEA | PlasmoDB |
MF | GO:0003723 | RNA binding | ISS | PlasmoDB |
CC | GO:0005634 | nucleus | IEA | PlasmoDB |
CC | GO:0005685 | U1 snRNP | ISS | PlasmoDB |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan predictions |
MF | GO:0008270 | zinc ion binding | IEA | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000036 | acyl carrier activity | IEP | Predicted GO |
CC | GO:0000178 | exosome (RNase complex) | IEP | Predicted GO |
BP | GO:0000280 | nuclear division | IEP | Predicted GO |
BP | GO:0000387 | spliceosomal snRNP assembly | IEP | Predicted GO |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
CC | GO:0002189 | ribose phosphate diphosphokinase complex | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0004000 | adenosine deaminase activity | IEP | Predicted GO |
MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Predicted GO |
MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0004457 | lactate dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004459 | L-lactate dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | Predicted GO |
MF | GO:0004784 | superoxide dismutase activity | IEP | Predicted GO |
MF | GO:0004824 | lysine-tRNA ligase activity | IEP | Predicted GO |
CC | GO:0005665 | RNA polymerase II, core complex | IEP | Predicted GO |
CC | GO:0005674 | transcription factor TFIIF complex | IEP | Predicted GO |
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0005742 | mitochondrial outer membrane translocase complex | IEP | Predicted GO |
CC | GO:0005746 | mitochondrial respirasome | IEP | Predicted GO |
CC | GO:0005956 | protein kinase CK2 complex | IEP | Predicted GO |
BP | GO:0006015 | 5-phosphoribose 1-diphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006366 | transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
BP | GO:0006430 | lysyl-tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0006448 | regulation of translational elongation | IEP | Predicted GO |
BP | GO:0006449 | regulation of translational termination | IEP | Predicted GO |
BP | GO:0006452 | translational frameshifting | IEP | Predicted GO |
BP | GO:0006528 | asparagine metabolic process | IEP | Predicted GO |
BP | GO:0006529 | asparagine biosynthetic process | IEP | Predicted GO |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
MF | GO:0008320 | protein transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0009893 | positive regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010628 | positive regulation of gene expression | IEP | Predicted GO |
CC | GO:0015935 | small ribosomal subunit | IEP | Predicted GO |
BP | GO:0015959 | diadenosine polyphosphate metabolic process | IEP | Predicted GO |
BP | GO:0015960 | diadenosine polyphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0015965 | diadenosine tetraphosphate metabolic process | IEP | Predicted GO |
BP | GO:0015966 | diadenosine tetraphosphate biosynthetic process | IEP | Predicted GO |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Predicted GO |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Predicted GO |
MF | GO:0016778 | diphosphotransferase activity | IEP | Predicted GO |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
MF | GO:0019239 | deaminase activity | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
BP | GO:0019439 | aromatic compound catabolic process | IEP | Predicted GO |
BP | GO:0019637 | organophosphate metabolic process | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
CC | GO:0022627 | cytosolic small ribosomal subunit | IEP | Predicted GO |
MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0030008 | TRAPP complex | IEP | Predicted GO |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
BP | GO:0032270 | positive regulation of cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Predicted GO |
BP | GO:0034975 | protein folding in endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0043243 | positive regulation of protein complex disassembly | IEP | Predicted GO |
BP | GO:0043244 | regulation of protein complex disassembly | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:0044281 | small molecule metabolic process | IEP | Predicted GO |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
CC | GO:0044445 | cytosolic part | IEP | Predicted GO |
CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
MF | GO:0044620 | ACP phosphopantetheine attachment site binding | IEP | Predicted GO |
BP | GO:0045727 | positive regulation of translation | IEP | Predicted GO |
BP | GO:0045901 | positive regulation of translational elongation | IEP | Predicted GO |
BP | GO:0045905 | positive regulation of translational termination | IEP | Predicted GO |
BP | GO:0046391 | 5-phosphoribose 1-diphosphate metabolic process | IEP | Predicted GO |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Predicted GO |
BP | GO:0046700 | heterocycle catabolic process | IEP | Predicted GO |
BP | GO:0046777 | protein autophosphorylation | IEP | Predicted GO |
BP | GO:0048285 | organelle fission | IEP | Predicted GO |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Predicted GO |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Predicted GO |
MF | GO:0051192 | prosthetic group binding | IEP | Predicted GO |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predicted GO |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
CC | GO:0070469 | respirasome | IEP | Predicted GO |
BP | GO:0070481 | nuclear-transcribed mRNA catabolic process, non-stop decay | IEP | Predicted GO |
BP | GO:0070966 | nuclear-transcribed mRNA catabolic process, no-go decay | IEP | Predicted GO |
BP | GO:0071025 | RNA surveillance | IEP | Predicted GO |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Predicted GO |
CC | GO:0072546 | ER membrane protein complex | IEP | Predicted GO |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | Predicted GO |
CC | GO:0098799 | outer mitochondrial membrane protein complex | IEP | Predicted GO |
CC | GO:0099023 | tethering complex | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
MF | GO:1904680 | peptide transmembrane transporter activity | IEP | Predicted GO |
CC | GO:1905354 | exoribonuclease complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013085 | U1-CZ_Znf_C2H2 | 1 | 38 |