1. Home
  2. Species
  3. Plasmodium falciparum 3D7
  4. Sequence
  5. PF3D7_0821600

PF3D7_0821600 (CLP1)


Aliases : CLP1

Description : SSF52540: P-loop containing nucleoside triphosphate hydrolase. Pfam domain(s): PF16573: N-terminal beta-sandwich domain of polyadenylation factor, PF16575: mRNA cleavage and polyadenylation factor CLP1 P-loop.


Gene families : OG_01_0000887 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_0821600
Cluster P. falciparum: Cluster_9


Type GO Term Name Evidence Source
CC GO:0000214 tRNA-intron endonuclease complex ISS PlasmoDB
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation ISS PlasmoDB
MF GO:0051733 polydeoxyribonucleotide kinase activity ISS PlasmoDB
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
CC GO:0000408 EKC/KEOPS complex IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005829 cytosol IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016075 rRNA catabolic process IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0034661 ncRNA catabolic process IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032324 Clp1_N 63 128
IPR032319 CLP1_P 143 178
PlasmoDB 2655491
PlasmoDB PF08_0040