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  5. PF3D7_0904800

PF3D7_0904800 (RPA1)


Aliases : RPA1

Description : SSF50249: "Nucleic acid-binding, OB-fold". Pfam domain(s): PF16900: Replication protein A OB domain, PF08646: Replication factor-A C terminal domain.


Gene families : OG_01_0000655 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_0904800
Cluster P. falciparum: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
PBANKA_0416600 No alias SSF50249: Nucleic acid-binding, OB-fold. Pfam domain(s):... 0.06 Orthofinderv1.1.8

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity IEP Predicted GO
BP GO:0001505 regulation of neurotransmitter levels IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003689 DNA clamp loader activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003911 DNA ligase (NAD+) activity IEP Predicted GO
MF GO:0003998 acylphosphatase activity IEP Predicted GO
MF GO:0004140 dephospho-CoA kinase activity IEP Predicted GO
MF GO:0004146 dihydrofolate reductase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004368 glycerol-3-phosphate dehydrogenase (quinone) activity IEP Predicted GO
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Predicted GO
MF GO:0004550 nucleoside diphosphate kinase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
MF GO:0004799 thymidylate synthase activity IEP Predicted GO
MF GO:0004839 ubiquitin activating enzyme activity IEP Predicted GO
MF GO:0005385 zinc ion transmembrane transporter activity IEP Predicted GO
MF GO:0005483 soluble NSF attachment protein activity IEP Predicted GO
CC GO:0005663 DNA replication factor C complex IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005784 Sec61 translocon complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005798 Golgi-associated vesicle IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP Predicted GO
BP GO:0006116 NADH oxidation IEP Predicted GO
BP GO:0006127 glycerophosphate shuttle IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006183 GTP biosynthetic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006228 UTP biosynthetic process IEP Predicted GO
BP GO:0006231 dTMP biosynthetic process IEP Predicted GO
BP GO:0006241 CTP biosynthetic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006271 DNA strand elongation involved in DNA replication IEP Predicted GO
BP GO:0006272 leading strand elongation IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006337 nucleosome disassembly IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006544 glycine metabolic process IEP Predicted GO
BP GO:0006545 glycine biosynthetic process IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006730 one-carbon metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006734 NADH metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006784 heme a biosynthetic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006829 zinc ion transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008379 thioredoxin peroxidase activity IEP Predicted GO
BP GO:0008535 respiratory chain complex IV assembly IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009162 deoxyribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009208 pyrimidine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009209 pyrimidine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP Predicted GO
CC GO:0009331 glycerol-3-phosphate dehydrogenase complex IEP Predicted GO
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019264 glycine biosynthetic process from serine IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
BP GO:0019692 deoxyribose phosphate metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
CC GO:0020011 apicoplast IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022616 DNA strand elongation IEP Predicted GO
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP Predicted GO
CC GO:0030135 coated vesicle IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030337 DNA polymerase processivity factor activity IEP Predicted GO
MF GO:0030604 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0031497 chromatin assembly IEP Predicted GO
MF GO:0032552 deoxyribonucleotide binding IEP Predicted GO
BP GO:0032986 protein-DNA complex disassembly IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
MF GO:0033170 protein-DNA loading ATPase activity IEP Predicted GO
BP GO:0034308 primary alcohol metabolic process IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0035999 tetrahydrofolate interconversion IEP Predicted GO
MF GO:0042083 5,10-methylenetetrahydrofolate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042133 neurotransmitter metabolic process IEP Predicted GO
BP GO:0042136 neurotransmitter biosynthetic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0042555 MCM complex IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043626 PCNA complex IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044796 DNA polymerase processivity factor complex IEP Predicted GO
BP GO:0046036 CTP metabolic process IEP Predicted GO
BP GO:0046039 GTP metabolic process IEP Predicted GO
BP GO:0046051 UTP metabolic process IEP Predicted GO
BP GO:0046073 dTMP metabolic process IEP Predicted GO
BP GO:0046160 heme a metabolic process IEP Predicted GO
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046416 D-amino acid metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0051095 regulation of helicase activity IEP Predicted GO
BP GO:0051097 negative regulation of helicase activity IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0061025 membrane fusion IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070178 D-serine metabolic process IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
CC GO:0071256 translocon complex IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
BP GO:1905462 regulation of DNA duplex unwinding IEP Predicted GO
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Predicted GO
BP GO:1905774 regulation of DNA helicase activity IEP Predicted GO
BP GO:1905775 negative regulation of DNA helicase activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
CC GO:1990229 iron-sulfur cluster assembly complex IEP Predicted GO
BP GO:2001251 negative regulation of chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR031657 REPA_OB_2 132 218
IPR013955 Rep_factor-A_C 306 444
PlasmoDB 813327
PlasmoDB PFI0235w