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  5. PF3D7_1024200

PF3D7_1024200


Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF00076: "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)".


Gene families : OG_01_0000692 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1024200
Cluster P. falciparum: Cluster_10


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
CC GO:0000932 P-body IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003876 AMP deaminase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004311 farnesyltranstransferase activity IEP Predicted GO
MF GO:0004353 glutamate dehydrogenase [NAD(P)+] activity IEP Predicted GO
MF GO:0004354 glutamate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
MF GO:0004738 pyruvate dehydrogenase activity IEP Predicted GO
MF GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005756 mitochondrial proton-transporting ATP synthase, central stalk IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006084 acetyl-CoA metabolic process IEP Predicted GO
BP GO:0006085 acetyl-CoA biosynthetic process IEP Predicted GO
BP GO:0006086 acetyl-CoA biosynthetic process from pyruvate IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006195 purine nucleotide catabolic process IEP Predicted GO
BP GO:0006196 AMP catabolic process IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008495 protoheme IX farnesyltransferase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009125 nucleoside monophosphate catabolic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009128 purine nucleoside monophosphate catabolic process IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009154 purine ribonucleotide catabolic process IEP Predicted GO
BP GO:0009158 ribonucleoside monophosphate catabolic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009169 purine ribonucleoside monophosphate catabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009261 ribonucleotide catabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016149 translation release factor activity, codon specific IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0019788 NEDD8 transferase activity IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0031497 chromatin assembly IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0035384 thioester biosynthetic process IEP Predicted GO
CC GO:0035770 ribonucleoprotein granule IEP Predicted GO
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predicted GO
BP GO:0042167 heme catabolic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043186 P granule IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
CC GO:0045254 pyruvate dehydrogenase complex IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
CC GO:0045269 proton-transporting ATP synthase, central stalk IEP Predicted GO
BP GO:0046033 AMP metabolic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
MF GO:0047623 adenosine-phosphate deaminase activity IEP Predicted GO
BP GO:0048033 heme o metabolic process IEP Predicted GO
BP GO:0048034 heme O biosynthetic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0071616 acyl-CoA biosynthetic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072523 purine-containing compound catabolic process IEP Predicted GO
MF GO:0097472 cyclin-dependent protein kinase activity IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 59 128
PlasmoDB 810392
PlasmoDB PF10_0235