Aliases : LSM1
Description : SSF50182: LSM domain superfamily. Pfam domain(s): PF01423: LSM domain.
Gene families : OG_01_0001127 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pfa RNA-seq: PF3D7_1124400 | |
Cluster | P. falciparum: Cluster_4 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | ISS | PlasmoDB |
MF | GO:0000339 | RNA cap binding | ISS | PlasmoDB |
CC | GO:0005634 | nucleus | IEA | PlasmoDB |
CC | GO:0005845 | mRNA cap binding complex | ISS | PlasmoDB |
BP | GO:0006397 | mRNA processing | ISS | PlasmoDB |
BP | GO:0008380 | RNA splicing | ISS | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001671 | ATPase activator activity | IEP | Predicted GO |
MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Predicted GO |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Predicted GO |
BP | GO:0006605 | protein targeting | IEP | Predicted GO |
BP | GO:0006612 | protein targeting to membrane | IEP | Predicted GO |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Predicted GO |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Predicted GO |
MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
MF | GO:0008312 | 7S RNA binding | IEP | Predicted GO |
MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Predicted GO |
MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
MF | GO:0033218 | amide binding | IEP | Predicted GO |
MF | GO:0042277 | peptide binding | IEP | Predicted GO |
BP | GO:0045047 | protein targeting to ER | IEP | Predicted GO |
CC | GO:0048500 | signal recognition particle | IEP | Predicted GO |
MF | GO:0051087 | chaperone binding | IEP | Predicted GO |
MF | GO:0051879 | Hsp90 protein binding | IEP | Predicted GO |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
MF | GO:0060590 | ATPase regulator activity | IEP | Predicted GO |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0072657 | protein localization to membrane | IEP | Predicted GO |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 15 | 79 |