Aliases : RPL38
Description : No superfamily available. Pfam domain(s): PF01781: Ribosomal L38e protein family.
Gene families : OG_01_0001105 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001105_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pfa RNA-seq: PF3D7_1130100 | |
Cluster | P. falciparum: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PBANKA_0918100 | RPL38 | No superfamily available. Pfam domain(s): PF01781:... | 0.06 | Orthofinderv1.1.8 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IDA | PlasmoDB |
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan predictions |
MF | GO:0003735 | structural constituent of ribosome | IEA | PlasmoDB |
CC | GO:0005622 | intracellular | IEA | Interproscan predictions |
CC | GO:0005622 | intracellular | IEA | PlasmoDB |
CC | GO:0005840 | ribosome | IEA | Interproscan predictions |
CC | GO:0005840 | ribosome | IEA | PlasmoDB |
BP | GO:0006412 | translation | ISS | PlasmoDB |
BP | GO:0006412 | translation | IEA | Interproscan predictions |
BP | GO:0006412 | translation | IEA | PlasmoDB |
CC | GO:0022625 | cytosolic large ribosomal subunit | IDA | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000221 | vacuolar proton-transporting V-type ATPase, V1 domain | IEP | Predicted GO |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
BP | GO:0000380 | alternative mRNA splicing, via spliceosome | IEP | Predicted GO |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
BP | GO:0002181 | cytoplasmic translation | IEP | Predicted GO |
MF | GO:0003713 | transcription coactivator activity | IEP | Predicted GO |
MF | GO:0004462 | lactoylglutathione lyase activity | IEP | Predicted GO |
MF | GO:0004526 | ribonuclease P activity | IEP | Predicted GO |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Predicted GO |
MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Predicted GO |
CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
CC | GO:0005684 | U2-type spliceosomal complex | IEP | Predicted GO |
CC | GO:0005688 | U6 snRNP | IEP | Predicted GO |
CC | GO:0005732 | small nucleolar ribonucleoprotein complex | IEP | Predicted GO |
CC | GO:0005829 | cytosol | IEP | Predicted GO |
CC | GO:0005853 | eukaryotic translation elongation factor 1 complex | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006749 | glutathione metabolic process | IEP | Predicted GO |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
CC | GO:0015935 | small ribosomal subunit | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
CC | GO:0016471 | vacuolar proton-transporting V-type ATPase complex | IEP | Predicted GO |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
CC | GO:0022627 | cytosolic small ribosomal subunit | IEP | Predicted GO |
BP | GO:0030091 | protein repair | IEP | Predicted GO |
CC | GO:0030677 | ribonuclease P complex | IEP | Predicted GO |
CC | GO:0033176 | proton-transporting V-type ATPase complex | IEP | Predicted GO |
MF | GO:0036524 | protein deglycase activity | IEP | Predicted GO |
BP | GO:0036525 | protein deglycation | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
CC | GO:1903561 | extracellular vesicle | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002675 | Ribosomal_L38e | 2 | 73 |