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  5. PF3D7_1134600

PF3D7_1134600


Description : SSF90229: "Zinc finger, CCCH-type superfamily". Pfam domain(s): PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar).


Gene families : OG_01_0000025 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1134600
Cluster P. falciparum: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
PBANKA_0503500 No alias SSF90229: Zinc finger, CCCH-type superfamily. Pfam... 0.03 Orthofinderv1.1.8
PBANKA_1237600 No alias SSF90229: Zinc finger, CCCH-type superfamily. Pfam... 0.03 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan predictions
MF GO:0046872 metal ion binding IEA PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005201 extracellular matrix structural constituent IEP Predicted GO
CC GO:0005581 collagen trimer IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 583 609
IPR000571 Znf_CCCH 515 539
PlasmoDB 810904
PlasmoDB PF11_0357