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  5. PF3D7_1144100

PF3D7_1144100


Description : No superfamily available. Pfam domain(s): PF05046: Mitochondrial large subunit ribosomal protein (Img2).


Gene families : OG_01_0001064 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1144100
Cluster P. falciparum: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
PBANKA_0904900 No alias No superfamily available. Pfam domain(s): PF05046:... 0.03 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan predictions
MF GO:0003735 structural constituent of ribosome IEA PlasmoDB
CC GO:0005622 intracellular IEA Interproscan predictions
CC GO:0005622 intracellular IEA PlasmoDB
CC GO:0005840 ribosome IEA Interproscan predictions
CC GO:0005840 ribosome IEA PlasmoDB
BP GO:0006412 translation IEA Interproscan predictions
BP GO:0006412 translation IEA PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005658 alpha DNA polymerase:primase complex IEP Predicted GO
CC GO:0005688 U6 snRNP IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0007021 tubulin complex assembly IEP Predicted GO
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0016925 protein sumoylation IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0032299 ribonuclease H2 complex IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0048487 beta-tubulin binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predicted GO
InterPro domains Description Start Stop
IPR007740 Ribosomal_L49/IMG2 46 123
PlasmoDB 8444952
PlasmoDB PF11_0560