Description : SSF53927: Cytidine deaminase-like. Pfam domain(s): PF00383: Cytidine and deoxycytidylate deaminase zinc-binding region.
Gene families : OG_01_0000766 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000766_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pfa RNA-seq: PF3D7_1204600 | |
Cluster | P. falciparum: Cluster_16 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEA | PlasmoDB |
BP | GO:0008033 | tRNA processing | IEA | PlasmoDB |
MF | GO:0008270 | zinc ion binding | IEA | PlasmoDB |
MF | GO:0016787 | hydrolase activity | IEA | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Predicted GO |
CC | GO:0000178 | exosome (RNase complex) | IEP | Predicted GO |
CC | GO:0000214 | tRNA-intron endonuclease complex | IEP | Predicted GO |
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
CC | GO:0000408 | EKC/KEOPS complex | IEP | Predicted GO |
BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
MF | GO:0004532 | exoribonuclease activity | IEP | Predicted GO |
MF | GO:0004540 | ribonuclease activity | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
BP | GO:0016075 | rRNA catabolic process | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
CC | GO:0030687 | preribosome, large subunit precursor | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034661 | ncRNA catabolic process | IEP | Predicted GO |
BP | GO:0042255 | ribosome assembly | IEP | Predicted GO |
BP | GO:0042273 | ribosomal large subunit biogenesis | IEP | Predicted GO |
BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
MF | GO:0051731 | polynucleotide 5'-hydroxyl-kinase activity | IEP | Predicted GO |
MF | GO:0051733 | polydeoxyribonucleotide kinase activity | IEP | Predicted GO |
BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
CC | GO:1902555 | endoribonuclease complex | IEP | Predicted GO |
CC | GO:1905348 | endonuclease complex | IEP | Predicted GO |
CC | GO:1905354 | exoribonuclease complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002125 | CMP_dCMP_dom | 165 | 292 |
PlasmoDB | 2277.t00047 |
PlasmoDB | 811099 |
PlasmoDB | MAL12P1.46 |
PlasmoDB | PFL0230w |