PF3D7_1303200 (VAMP8)

Aliases : VAMP8

Description : SSF64356: Longin-like domain superfamily, SSF58038: No description available. Pfam domain(s): PF13774: Regulated-SNARE-like domain, PF00957: Synaptobrevin.

Gene families : OG_01_0003167 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0003167_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pfa RNA-seq: PF3D7_1303200
Cluster	P. falciparum: Cluster_24

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005484	SNAP receptor activity	ISS	PlasmoDB
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan predictions
CC	GO:0016021	integral component of membrane	IEA	PlasmoDB
BP	GO:0016192	vesicle-mediated transport	TAS	PlasmoDB
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan predictions
BP	GO:0016192	vesicle-mediated transport	IEA	PlasmoDB
CC	GO:0031201	SNARE complex	ISS	PlasmoDB
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0031338	regulation of vesicle fusion	ISS	PlasmoDB
BP	GO:0032879	regulation of localization	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0060627	regulation of vesicle-mediated transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003747	translation release factor activity	IEP	Predicted GO
MF	GO:0003987	acetate-CoA ligase activity	IEP	Predicted GO
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0006415	translational termination	IEP	Predicted GO
BP	GO:0006465	signal peptide processing	IEP	Predicted GO
MF	GO:0008079	translation termination factor activity	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
MF	GO:0016149	translation release factor activity, codon specific	IEP	Predicted GO
MF	GO:0016208	AMP binding	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0016405	CoA-ligase activity	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
MF	GO:0016878	acid-thiol ligase activity	IEP	Predicted GO
CC	GO:0020011	apicoplast	IEP	Predicted GO
BP	GO:0022411	cellular component disassembly	IEP	Predicted GO
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Predicted GO
CC	GO:0030121	AP-1 adaptor complex	IEP	Predicted GO
CC	GO:0030131	clathrin adaptor complex	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0032984	protein-containing complex disassembly	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0043624	cellular protein complex disassembly	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010908	Longin_dom	30	98
IPR001388	Synaptobrevin	121	205
IPR001388	Synaptobrevin	293	377

External Links

PlasmoDB	813712
PlasmoDB	MAL13P1.16

PF3D7_1303200 (VAMP8)

Expression Profile

Co-expression Networks

Functional Annotation