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  5. PF3D7_1355300

PF3D7_1355300 (SET6)


Aliases : SET6

Description : SSF82199: No description available, SSF144232: No description available. Pfam domain(s): PF01753: MYND finger, PF00856: SET domain.


Gene families : OG_01_0001484 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1355300
Cluster P. falciparum: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
PBANKA_1131800 No alias SSF82199: 20-02-2019, SSF144232: 20-02-2019. Pfam... 0.03 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan predictions
MF GO:0005515 protein binding IEA PlasmoDB
CC GO:0034399 nuclear periphery IDA PlasmoDB
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Type GO Term Name Evidence Source
CC GO:0000127 transcription factor TFIIIC complex IEP Predicted GO
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predicted GO
CC GO:0000408 EKC/KEOPS complex IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
BP GO:0002143 tRNA wobble position uridine thiolation IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003727 single-stranded RNA binding IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003963 RNA-3'-phosphate cyclase activity IEP Predicted GO
MF GO:0004532 exoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006743 ubiquinone metabolic process IEP Predicted GO
BP GO:0006744 ubiquinone biosynthetic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008169 C-methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008187 poly-pyrimidine tract binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008425 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity IEP Predicted GO
MF GO:0008689 3-demethylubiquinone-9 3-O-methyltransferase activity IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030430 host cell cytoplasm IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0030580 quinone cofactor methyltransferase activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030686 90S preribosome IEP Predicted GO
CC GO:0031428 box C/D snoRNP complex IEP Predicted GO
BP GO:0032447 protein urmylation IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042181 ketone biosynthetic process IEP Predicted GO
BP GO:0042274 ribosomal small subunit biogenesis IEP Predicted GO
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0061542 3-demethylubiquinone-n 3-O-methyltransferase activity IEP Predicted GO
CC GO:0071013 catalytic step 2 spliceosome IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0090576 RNA polymerase III transcription factor complex IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901661 quinone metabolic process IEP Predicted GO
BP GO:1901663 quinone biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002893 Znf_MYND 62 100
IPR001214 SET_dom 195 249
PlasmoDB 814257
PlasmoDB PF13_0293