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  5. PF3D7_1360900

PF3D7_1360900


Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF00076: "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)".


Gene families : OG_01_0004691 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0004691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1360900
Cluster P. falciparum: Cluster_31


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
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Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP Predicted GO
CC GO:0000792 heterochromatin IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004311 farnesyltranstransferase activity IEP Predicted GO
MF GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity IEP Predicted GO
MF GO:0004326 tetrahydrofolylpolyglutamate synthase activity IEP Predicted GO
MF GO:0004333 fumarate hydratase activity IEP Predicted GO
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Predicted GO
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0004774 succinate-CoA ligase activity IEP Predicted GO
MF GO:0004775 succinate-CoA ligase (ADP-forming) activity IEP Predicted GO
MF GO:0004791 thioredoxin-disulfide reductase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005788 endoplasmic reticulum lumen IEP Predicted GO
CC GO:0005813 centrosome IEP Predicted GO
CC GO:0005815 microtubule organizing center IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
CC GO:0005868 cytoplasmic dynein complex IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006104 succinyl-CoA metabolic process IEP Predicted GO
BP GO:0006106 fumarate metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006268 DNA unwinding involved in DNA replication IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006272 leading strand elongation IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006337 nucleosome disassembly IEP Predicted GO
BP GO:0006410 obsolete transcription, RNA-dependent IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006545 glycine biosynthetic process IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006627 protein processing involved in protein targeting to mitochondrion IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008495 protoheme IX farnesyltransferase activity IEP Predicted GO
BP GO:0008535 respiratory chain complex IV assembly IEP Predicted GO
MF GO:0008841 dihydrofolate synthase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015037 peptide disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015038 glutathione disulfide oxidoreductase activity IEP Predicted GO
BP GO:0015074 DNA integration IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016539 intein-mediated protein splicing IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
CC GO:0017087 mitochondrial processing peptidase complex IEP Predicted GO
BP GO:0018105 peptidyl-serine phosphorylation IEP Predicted GO
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Predicted GO
BP GO:0018144 RNA-protein covalent cross-linking IEP Predicted GO
BP GO:0018209 peptidyl-serine modification IEP Predicted GO
BP GO:0019264 glycine biosynthetic process from serine IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
CC GO:0019774 proteasome core complex, beta-subunit complex IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030908 protein splicing IEP Predicted GO
MF GO:0031079 obsolete picornain 3C activity IEP Predicted GO
BP GO:0031935 regulation of chromatin silencing IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0032392 DNA geometric change IEP Predicted GO
BP GO:0032508 DNA duplex unwinding IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032986 protein-DNA complex disassembly IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
CC GO:0034399 nuclear periphery IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034982 mitochondrial protein processing IEP Predicted GO
BP GO:0035999 tetrahydrofolate interconversion IEP Predicted GO
BP GO:0042136 neurotransmitter biosynthetic process IEP Predicted GO
CC GO:0042555 MCM complex IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046416 D-amino acid metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
MF GO:0046982 protein heterodimerization activity IEP Predicted GO
BP GO:0048033 heme o metabolic process IEP Predicted GO
BP GO:0048034 heme O biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048306 calcium-dependent protein binding IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051049 regulation of transport IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055074 calcium ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0060627 regulation of vesicle-mediated transport IEP Predicted GO
BP GO:0060968 regulation of gene silencing IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0070178 D-serine metabolic process IEP Predicted GO
BP GO:0070682 proteasome regulatory particle assembly IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072507 divalent inorganic cation homeostasis IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1902275 regulation of chromatin organization IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 118 187
IPR000504 RRM_dom 209 278
IPR000504 RRM_dom 18 82
PlasmoDB 813867
PlasmoDB MAL13P1.303