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  5. PF3D7_1417200

PF3D7_1417200


Description : No superfamily available. Pfam domain(s): PF04054: "CCR4-Not complex component, Not1", PF12842: Domain of unknown function (DUF3819).


Gene families : OG_01_0000126 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1417200
Cluster P. falciparum: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
PBANKA_0943100 NOT1 No superfamily available. Pfam domain(s): PF16415:... 0.08 Orthofinderv1.1.8
PBANKA_1025500 No alias No superfamily available. Pfam domain(s): PF04054:... 0.18 Orthofinderv1.1.8

Type GO Term Name Evidence Source
CC GO:0030014 CCR4-NOT complex ISM PlasmoDB
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Type GO Term Name Evidence Source
CC GO:0000177 cytoplasmic exosome (RNase complex) IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004686 elongation factor-2 kinase activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005794 Golgi apparatus IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006607 NLS-bearing protein import into nucleus IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
CC GO:0030122 AP-2 adaptor complex IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042493 response to drug IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR007196 CCR4-Not_Not1_C 4004 4233
IPR007196 CCR4-Not_Not1_C 4327 4459
IPR024557 CCR4-Not_Not1su_DUF3819 2178 2324
PlasmoDB 811751
PlasmoDB PF14_0170