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  5. PF3D7_1417500

PF3D7_1417500 (CBF5)


Aliases : CBF5

Description : SSF55120: "Pseudouridine synthase, catalytic domain superfamily", SSF88697: PUA-like superfamily. Pfam domain(s): PF01472: PUA domain, PF01509: TruB family pseudouridylate synthase (N terminal domain), PF08068: DKCLD (NUC011) domain, PF16198: tRNA pseudouridylate synthase B C-terminal domain.


Gene families : OG_01_0001299 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1417500
Cluster P. falciparum: Cluster_42


Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA PlasmoDB
MF GO:0003723 RNA binding IEA Interproscan predictions
MF GO:0003723 RNA binding IEA PlasmoDB
BP GO:0006396 RNA processing IEA Interproscan predictions
BP GO:0006396 RNA processing IEA PlasmoDB
BP GO:0009451 RNA modification IEA PlasmoDB
MF GO:0009982 pseudouridine synthase activity IEA PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000354 cis assembly of pre-catalytic spliceosome IEP Predicted GO
CC GO:0000974 Prp19 complex IEP Predicted GO
MF GO:0004151 dihydroorotase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005684 U2-type spliceosomal complex IEP Predicted GO
CC GO:0005688 U6 snRNP IEP Predicted GO
CC GO:0005884 actin filament IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007021 tubulin complex assembly IEP Predicted GO
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEP Predicted GO
BP GO:0016925 protein sumoylation IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
CC GO:0032299 ribonuclease H2 complex IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035650 AP-1 adaptor complex binding IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0048487 beta-tubulin binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
CC GO:0071004 U2-type prespliceosome IEP Predicted GO
CC GO:0071010 prespliceosome IEP Predicted GO
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predicted GO
InterPro domains Description Start Stop
IPR002501 PsdUridine_synth_N 82 198
IPR012960 Dyskerin-like 21 78
IPR032819 TruB_C 199 265
IPR002478 PUA 269 341
PlasmoDB 811755
PlasmoDB PF14_0174