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  5. PF3D7_1420000

PF3D7_1420000 (SF3B4)


Aliases : SF3B4

Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF00076: "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)".


Gene families : OG_01_0001290 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1420000
Cluster P. falciparum: Cluster_58


Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions ISS PlasmoDB
BP GO:0000398 mRNA splicing, via spliceosome ISS PlasmoDB
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
CC GO:0005681 spliceosomal complex ISS PlasmoDB
BP GO:0008380 RNA splicing ISS PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
CC GO:0071013 catalytic step 2 spliceosome IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 109 178
IPR000504 RRM_dom 22 92
PlasmoDB 811775
PlasmoDB PF14_0194