PF3D7_1438500 (CPSF3)

Aliases : CPSF3

Description : SSF56281: Ribonuclease Z/Hydroxyacylglutathione hydrolase-like. Pfam domain(s): PF16661: Metallo-beta-lactamase superfamily domain, PF07521: Zn-dependent metallo-hydrolase RNA specificity domain, PF11718: Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term, PF10996: Beta-Casp domain.

Gene families : OG_01_0001750 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001750_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pfa RNA-seq: PF3D7_1438500
Cluster	P. falciparum: Cluster_18

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISO	PlasmoDB
CC	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	ISS	PlasmoDB
CC	GO:0005849	mRNA cleavage factor complex	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006378	mRNA polyadenylation	ISS	PlasmoDB
BP	GO:0006379	mRNA cleavage	ISS	PlasmoDB
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0031123	RNA 3'-end processing	None	Extended
BP	GO:0031124	mRNA 3'-end processing	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042493	response to drug	IMP	PlasmoDB
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043631	RNA polyadenylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044451	nucleoplasm part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
BP	GO:0090501	RNA phosphodiester bond hydrolysis	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004788	thiamine diphosphokinase activity	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0006772	thiamine metabolic process	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
BP	GO:0009229	thiamine diphosphate biosynthetic process	IEP	Predicted GO
MF	GO:0016778	diphosphotransferase activity	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030975	thiamine binding	IEP	Predicted GO
BP	GO:0042357	thiamine diphosphate metabolic process	IEP	Predicted GO
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001279	Metallo-B-lactamas	21	237
IPR011108	RMMBL	432	493
IPR021718	CPSF73-100_C	594	872
IPR022712	Beta_Casp	291	418

External Links

PlasmoDB	811946
PlasmoDB	PF14_0364

PF3D7_1438500 (CPSF3)

Expression Profile

Co-expression Networks

Functional Annotation