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  5. PF3D7_1443300

PF3D7_1443300 (LSM5)


Aliases : LSM5

Description : SSF50182: LSM domain superfamily. Pfam domain(s): PF01423: LSM domain.


Gene families : OG_01_0001765 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1443300
Cluster P. falciparum: Cluster_4


Type GO Term Name Evidence Source
CC GO:0005732 small nucleolar ribonucleoprotein complex ISS PlasmoDB
BP GO:0008380 RNA splicing ISS PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0004828 serine-tRNA ligase activity IEP Predicted GO
MF GO:0005342 organic acid transmembrane transporter activity IEP Predicted GO
CC GO:0005887 integral component of plasma membrane IEP Predicted GO
BP GO:0006434 seryl-tRNA aminoacylation IEP Predicted GO
BP GO:0006846 acetate transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015129 lactate transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015293 symporter activity IEP Predicted GO
MF GO:0015294 solute:cation symporter activity IEP Predicted GO
MF GO:0015295 solute:proton symporter activity IEP Predicted GO
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP Predicted GO
MF GO:0015650 lactate:proton symporter activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015724 formate transport IEP Predicted GO
BP GO:0015727 lactate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0015850 organic hydroxy compound transport IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0020036 Maurer's cleft IEP Predicted GO
CC GO:0030430 host cell cytoplasm IEP Predicted GO
CC GO:0031982 vesicle IEP Predicted GO
CC GO:0033643 host cell part IEP Predicted GO
CC GO:0033646 host intracellular part IEP Predicted GO
CC GO:0033655 host cell cytoplasm part IEP Predicted GO
BP GO:0035873 lactate transmembrane transport IEP Predicted GO
BP GO:0042891 antibiotic transport IEP Predicted GO
CC GO:0043230 extracellular organelle IEP Predicted GO
CC GO:0044164 host cell cytosol IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
CC GO:0044228 host cell surface IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Predicted GO
CC GO:1903561 extracellular vesicle IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 15 82
PlasmoDB 811993
PlasmoDB PF14_0411