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  5. PF3D7_1454000

PF3D7_1454000


Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF01585: G-patch domain, PF00076: "RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)".


Gene families : OG_01_0001807 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1454000
Cluster P. falciparum: Cluster_28


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
MF GO:0003723 RNA binding ISS PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predicted GO
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
CC GO:0000214 tRNA-intron endonuclease complex IEP Predicted GO
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
CC GO:0000408 EKC/KEOPS complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0001775 cell activation IEP Predicted GO
MF GO:0004753 saccharopine dehydrogenase activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016075 rRNA catabolic process IEP Predicted GO
CC GO:0016234 inclusion body IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016783 sulfurtransferase activity IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0031071 cysteine desulfurase activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0034661 ncRNA catabolic process IEP Predicted GO
BP GO:0042113 B cell activation IEP Predicted GO
BP GO:0045321 leukocyte activation IEP Predicted GO
BP GO:0046649 lymphocyte activation IEP Predicted GO
MF GO:0047131 saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0051731 polynucleotide 5'-hydroxyl-kinase activity IEP Predicted GO
MF GO:0051733 polydeoxyribonucleotide kinase activity IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:1902555 endoribonuclease complex IEP Predicted GO
CC GO:1905348 endonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000467 G_patch_dom 350 390
IPR000504 RRM_dom 433 494
PlasmoDB 812095
PlasmoDB PF14_0513