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  5. PF3D7_1475200

PF3D7_1475200


Description : SSF52540: P-loop containing nucleoside triphosphate hydrolase. Pfam domain(s): PF07717: Oligonucleotide/oligosaccharide-binding (OB)-fold, PF04408: Helicase associated domain (HA2).


Gene families : OG_01_0004147 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0004147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pfa RNA-seq: PF3D7_1475200
Cluster P. falciparum: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
PBANKA_1301000 No alias SSF52540: P-loop containing nucleoside triphosphate... 0.03 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA PlasmoDB
MF GO:0004386 helicase activity IEA Interproscan predictions
MF GO:0004386 helicase activity IEA PlasmoDB
MF GO:0005524 ATP binding IEA PlasmoDB
CC GO:0005634 nucleus IEA PlasmoDB
MF GO:0008026 ATP-dependent helicase activity IEA PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003721 telomerase RNA reverse transcriptase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0003964 RNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004520 endodeoxyribonuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004536 deoxyribonuclease activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006261 DNA-dependent DNA replication IEP Predicted GO
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007004 telomere maintenance via telomerase IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0010833 telomere maintenance via telomere lengthening IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0032202 telomere assembly IEP Predicted GO
BP GO:0032203 telomere formation via telomerase IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071897 DNA biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR011709 DUF1605 870 952
IPR007502 Helicase-assoc_dom 730 792
PlasmoDB 812302
PlasmoDB PF14_0720