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PBANKA_0110000


Description : SSF48662: Ribosomal protein L39e domain superfamily. Pfam domain(s): PF00832: Ribosomal L39 protein.


Gene families : OG_01_0002293 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0002293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0110000
Cluster P. berghei: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
PF3D7_0611700 RPL39 SSF48662: Ribosomal protein L39e domain superfamily.... 0.14 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan predictions
MF GO:0003735 structural constituent of ribosome IEA PlasmoDB
CC GO:0005622 intracellular IEA Interproscan predictions
CC GO:0005622 intracellular IEA PlasmoDB
CC GO:0005840 ribosome IEA Interproscan predictions
CC GO:0005840 ribosome IEA PlasmoDB
BP GO:0006412 translation IEA Interproscan predictions
BP GO:0006412 translation IEA PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0030621 U4 snRNA binding IEP Predicted GO
CC GO:0030687 preribosome, large subunit precursor IEP Predicted GO
CC GO:0033643 host cell part IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042273 ribosomal large subunit biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
CC GO:0044228 host cell surface IEP Predicted GO
InterPro domains Description Start Stop
IPR000077 Ribosomal_L39 10 49
PlasmoDB PB402098.00.0
PlasmoDB PBANKA_011000