Description : SSF50249: Nucleic acid-binding, OB-fold. Pfam domain(s): PF00313: 'Cold-shock' DNA-binding domain.
Gene families : OG_01_0000182 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000182_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pbe RNA-seq: PBANKA_0204000 | |
Cluster | P. berghei: Cluster_15 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan predictions |
MF | GO:0003676 | nucleic acid binding | IEA | PlasmoDB |
MF | GO:0003677 | DNA binding | IEA | PlasmoDB |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predicted GO |
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
MF | GO:0004520 | endodeoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0004536 | deoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0004735 | pyrroline-5-carboxylate reductase activity | IEP | Predicted GO |
MF | GO:0004802 | transketolase activity | IEP | Predicted GO |
CC | GO:0005666 | RNA polymerase III complex | IEP | Predicted GO |
CC | GO:0005768 | endosome | IEP | Predicted GO |
BP | GO:0006560 | proline metabolic process | IEP | Predicted GO |
BP | GO:0006561 | proline biosynthetic process | IEP | Predicted GO |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009405 | pathogenesis | IEP | Predicted GO |
BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
BP | GO:0010038 | response to metal ion | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016744 | transferase activity, transferring aldehyde or ketonic groups | IEP | Predicted GO |
MF | GO:0016888 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
MF | GO:0032451 | demethylase activity | IEP | Predicted GO |
CC | GO:0033644 | host cell membrane | IEP | Predicted GO |
BP | GO:0042221 | response to chemical | IEP | Predicted GO |
CC | GO:0044217 | other organism part | IEP | Predicted GO |
CC | GO:0044218 | other organism cell membrane | IEP | Predicted GO |
CC | GO:0044279 | other organism membrane | IEP | Predicted GO |
CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predicted GO |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
BP | GO:0070988 | demethylation | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Predicted GO |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002059 | CSP_DNA-bd | 35 | 78 |
PlasmoDB | PB000932.00.0 |
PlasmoDB | PBANKA_020400 |