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  5. PBANKA_0214800

PBANKA_0214800


Description : SSF49493: HSP40/DnaJ peptide-binding, SSF46565: Chaperone J-domain superfamily. Pfam domain(s): PF01556: DnaJ C terminal domain, PF00226: DnaJ domain.


Gene families : OG_01_0000060 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0214800
Cluster P. berghei: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
PF3D7_0113700 HSP40 SSF49493: HSP40/DnaJ peptide-binding, SSF46565:... 0.02 Orthofinderv1.1.8
PF3D7_0501100 HSP40 SSF49493: HSP40/DnaJ peptide-binding, SSF46565:... 0.02 Orthofinderv1.1.8

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA PlasmoDB
CC GO:0030430 host cell cytoplasm ISO PlasmoDB
MF GO:0051082 unfolded protein binding IEA PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
MF GO:0001047 core promoter binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003727 single-stranded RNA binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008143 poly(A) binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0030621 U4 snRNA binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
CC GO:0035770 ribonucleoprotein granule IEP Predicted GO
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0043186 P granule IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070717 poly-purine tract binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 80 145
IPR002939 DnaJ_C 219 375
PlasmoDB PB001449.02.0
PlasmoDB PB300598.00.0
PlasmoDB PBANKA_021480