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  5. PBANKA_0300200

PBANKA_0300200


Description : No superfamily available. Pfam domain(s): PF06022: Plasmodium variant antigen protein Cir/Yir/Bir.


Gene families : OG_01_0000000 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0300200
Cluster P. berghei: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
PBANKA_0000801 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_0001501 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_0007000 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_0112681 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_0216061 No alias No superfamily available. Pfam domain(s): PF06022:... 0.05 Orthofinderv1.1.8
PBANKA_0317001 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_0317181 No alias No superfamily available. Pfam domain(s): PF06022:... 0.05 Orthofinderv1.1.8
PBANKA_0600200 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_0700061 No alias No superfamily available. Pfam domain(s): PF06022:... 0.05 Orthofinderv1.1.8
PBANKA_0700071 No alias No superfamily available. Pfam domain(s): PF06022:... 0.05 Orthofinderv1.1.8
PBANKA_0722961 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_0837181 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_1040500 No alias No superfamily available. Pfam domain(s): PF06022:... 0.08 Orthofinderv1.1.8
PBANKA_1200031 No alias No superfamily available. Pfam domain(s): PF06022:... 0.05 Orthofinderv1.1.8
PBANKA_1200081 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_1246121 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_1246981 No alias No superfamily available. Pfam domain(s): PF06022:... 0.06 Orthofinderv1.1.8
PBANKA_1465200 No alias No superfamily available. Pfam domain(s): PF06022:... 0.03 Orthofinderv1.1.8
PBANKA_1465921 No alias No superfamily available. Pfam domain(s): PF06022:... 0.05 Orthofinderv1.1.8

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0001047 core promoter binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
CC GO:0002189 ribose phosphate diphosphokinase complex IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004825 methionine-tRNA ligase activity IEP Predicted GO
BP GO:0006015 5-phosphoribose 1-diphosphate biosynthetic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006047 UDP-N-acetylglucosamine metabolic process IEP Predicted GO
BP GO:0006048 UDP-N-acetylglucosamine biosynthetic process IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006431 methionyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
MF GO:0016273 arginine N-methyltransferase activity IEP Predicted GO
MF GO:0016274 protein-arginine N-methyltransferase activity IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0018195 peptidyl-arginine modification IEP Predicted GO
BP GO:0018216 peptidyl-arginine methylation IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0035246 peptidyl-arginine N-methylation IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046349 amino sugar biosynthetic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
BP GO:0046391 5-phosphoribose 1-diphosphate metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006477 Yir_bir_cir 6 294
PlasmoDB PB200001.00.0
PlasmoDB PBANKA_030020