Aliases : PRP45
Description : No superfamily available. Pfam domain(s): PF02731: SKIP/SNW domain.
Gene families : OG_01_0000595 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000595_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pbe RNA-seq: PBANKA_0315400 | |
Cluster | P. berghei: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PF3D7_0218700 | PRP45 | No superfamily available. Pfam domain(s): PF02731:... | 0.09 | Orthofinderv1.1.8 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | Interproscan predictions |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | PlasmoDB |
CC | GO:0005681 | spliceosomal complex | IEA | Interproscan predictions |
CC | GO:0005681 | spliceosomal complex | IEA | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003724 | RNA helicase activity | IEP | Predicted GO |
MF | GO:0004004 | ATP-dependent RNA helicase activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Predicted GO |
MF | GO:0008186 | RNA-dependent ATPase activity | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Predicted GO |
CC | GO:0031225 | anchored component of membrane | IEP | Predicted GO |
CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
BP | GO:0032784 | regulation of DNA-templated transcription, elongation | IEP | Predicted GO |
CC | GO:0034457 | Mpp10 complex | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
CC | GO:0046658 | anchored component of plasma membrane | IEP | Predicted GO |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004015 | SKI-int_prot_SKIP_SNW-dom | 186 | 341 |
PlasmoDB | PB000931.01.0 |
PlasmoDB | PB301391.00.0 |
PlasmoDB | PBANKA_031540 |