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  5. PBANKA_0404000

PBANKA_0404000


Description : No superfamily available. Pfam domain(s): PF04118: Dopey, N-terminal.


Gene families : OG_01_0000612 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0404000
Cluster P. berghei: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
PF3D7_0305500 No alias SSF48371: Armadillo-type fold. Pfam domain(s): PF04118:... 0.09 Orthofinderv1.1.8

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006379 mRNA cleavage IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016434 rRNA (cytosine) methyltransferase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0030490 maturation of SSU-rRNA IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031590 wybutosine metabolic process IEP Predicted GO
BP GO:0031591 wybutosine biosynthetic process IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007249 Dopey_N 13 259
PlasmoDB PB000570.01.0
PlasmoDB PBANKA_040400