PBANKA_0524600

Description : No superfamily available. Pfam domain(s): PF06022: Plasmodium variant antigen protein Cir/Yir/Bir.

Gene families : OG_01_0004922 (Orthofinderv1.1.8) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pbe RNA-seq: PBANKA_0524600
Cluster	P. berghei: Cluster_1

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IDA	PlasmoDB
CC	GO:0030430	host cell cytoplasm	IDA	PlasmoDB
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0044217	other organism part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000993	RNA polymerase II complex binding	IEP	Predicted GO
MF	GO:0001098	basal transcription machinery binding	IEP	Predicted GO
MF	GO:0001099	basal RNA polymerase II transcription machinery binding	IEP	Predicted GO
CC	GO:0005669	transcription factor TFIID complex	IEP	Predicted GO
BP	GO:0006354	DNA-templated transcription, elongation	IEP	Predicted GO
BP	GO:0006368	transcription elongation from RNA polymerase II promoter	IEP	Predicted GO
BP	GO:0006897	endocytosis	IEP	Predicted GO
CC	GO:0008023	transcription elongation factor complex	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
CC	GO:0009986	cell surface	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
CC	GO:0020008	rhoptry	IEP	Predicted GO
CC	GO:0020009	microneme	IEP	Predicted GO
BP	GO:0031204	posttranslational protein targeting to membrane, translocation	IEP	Predicted GO
CC	GO:0031207	Sec62/Sec63 complex	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predicted GO
MF	GO:0043175	RNA polymerase core enzyme binding	IEP	Predicted GO
CC	GO:0044451	nucleoplasm part	IEP	Predicted GO
MF	GO:0070063	RNA polymerase binding	IEP	Predicted GO
CC	GO:0097619	PTEX complex	IEP	Predicted GO
BP	GO:0098657	import into cell	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006477	Yir_bir_cir	33	165

External Links

PlasmoDB	PB100046.00.0
PlasmoDB	PBANKA_052460