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  5. PBANKA_0700561

PBANKA_0700561


Description : No superfamily available. Pfam domain(s): No Pfam domain available.


Gene families : OG_01_0000005 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0700561
Cluster P. berghei: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
PBANKA_0000901 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.02 Orthofinderv1.1.8
PBANKA_0001200 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.02 Orthofinderv1.1.8
PBANKA_0700500 No alias SSF55961: 20-02-2019. Pfam domain(s): PF07418: Acidic... 0.07 Orthofinderv1.1.8
PBANKA_0800200 No alias SSF55961: 20-02-2019. Pfam domain(s): PF07418: Acidic... 0.02 Orthofinderv1.1.8
PBANKA_0837201 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.02 Orthofinderv1.1.8
PBANKA_1200051 No alias SSF55961: 20-02-2019. Pfam domain(s): No Pfam domain available. 0.04 Orthofinderv1.1.8
PBANKA_1200091 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.04 Orthofinderv1.1.8
PBANKA_1246941 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.02 Orthofinderv1.1.8
PBANKA_1300051 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.02 Orthofinderv1.1.8
PBANKA_1465700 No alias SSF55961: 20-02-2019. Pfam domain(s): PF07418: Acidic... 0.02 Orthofinderv1.1.8
PBANKA_1466141 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.04 Orthofinderv1.1.8
PBANKA_1466221 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.02 Orthofinderv1.1.8

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000245 spliceosomal complex assembly IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001047 core promoter binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004825 methionine-tRNA ligase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
CC GO:0005654 nucleoplasm IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006431 methionyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0030621 U4 snRNA binding IEP Predicted GO
CC GO:0031429 box H/ACA snoRNP complex IEP Predicted GO
CC GO:0033643 host cell part IEP Predicted GO
CC GO:0033646 host intracellular part IEP Predicted GO
CC GO:0033655 host cell cytoplasm part IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
CC GO:0043657 host cell IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
CC GO:0044216 other organism cell IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046789 host cell surface receptor binding IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
CC GO:0070971 endoplasmic reticulum exit site IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0072588 box H/ACA RNP complex IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO

No InterPro domains available for this sequence

PlasmoDB PB108485.00.0
PlasmoDB PB402122.00.0
PlasmoDB PB403055.00.0
PlasmoDB PB403073.00.0
PlasmoDB PBANKA_000020
PlasmoDB PBANKA_000350