1. Home
  2. Species
  3. Plasmodium berghei ANKA
  4. Sequence
  5. PBANKA_0720500

PBANKA_0720500


Description : SSF50182: LSM domain superfamily. Pfam domain(s): No Pfam domain available.


Gene families : OG_01_0003625 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0003625_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0720500
Cluster P. berghei: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
PF3D7_0418400 No alias SSF50182: LSM domain superfamily. Pfam domain(s): No... 0.02 Orthofinderv1.1.8

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
CC GO:0005682 U5 snRNP IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0007005 mitochondrion organization IEP Predicted GO
BP GO:0007006 mitochondrial membrane organization IEP Predicted GO
BP GO:0007007 inner mitochondrial membrane organization IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
CC GO:0019005 SCF ubiquitin ligase complex IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predicted GO
BP GO:0045039 protein import into mitochondrial inner membrane IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0051382 kinetochore assembly IEP Predicted GO
BP GO:0051383 kinetochore organization IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0072546 ER membrane protein complex IEP Predicted GO
BP GO:0090151 establishment of protein localization to mitochondrial membrane IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

PlasmoDB PB000497.01.0
PlasmoDB PBANKA_072050