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  5. PBANKA_0801900

PBANKA_0801900


Description : SSF53335: S-adenosyl-L-methionine-dependent methyltransferase. Pfam domain(s): PF01189: 16S rRNA methyltransferase RsmB/F.


Gene families : OG_01_0000288 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0801900
Cluster P. berghei: Cluster_45


Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan predictions
MF GO:0008168 methyltransferase activity IEA PlasmoDB
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Type GO Term Name Evidence Source
CC GO:0000172 ribonuclease MRP complex IEP Predicted GO
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predicted GO
CC GO:0000177 cytoplasmic exosome (RNase complex) IEP Predicted GO
BP GO:0002143 tRNA wobble position uridine thiolation IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004651 polynucleotide 5'-phosphatase activity IEP Predicted GO
MF GO:0004815 aspartate-tRNA ligase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006422 aspartyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0030014 CCR4-NOT complex IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030544 Hsp70 protein binding IEP Predicted GO
BP GO:0031120 snRNA pseudouridine synthesis IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0040031 snRNA modification IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0051879 Hsp90 protein binding IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0098518 polynucleotide phosphatase activity IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1990481 mRNA pseudouridine synthesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 302 537
PlasmoDB PB000085.02.0
PlasmoDB PB000645.03.0
PlasmoDB PB001227.00.0
PlasmoDB PBANKA_080190