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PBANKA_0824800 (PABP2)


Aliases : PABP2

Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).


Gene families : OG_01_0001021 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0824800
Cluster P. berghei: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
PF3D7_0923900 PABP2 SSF54928: RNA-binding domain superfamily. Pfam... 0.03 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
CC GO:0005634 nucleus ISO PlasmoDB
CC GO:0005829 cytosol ISO PlasmoDB
MF GO:0008143 poly(A) binding ISO PlasmoDB
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
CC GO:0005665 RNA polymerase II, core complex IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008379 thioredoxin peroxidase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
CC GO:0020003 symbiont-containing vacuole IEP Predicted GO
CC GO:0020026 merozoite dense granule IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
CC GO:0030430 host cell cytoplasm IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0030621 U4 snRNA binding IEP Predicted GO
CC GO:0033643 host cell part IEP Predicted GO
CC GO:0033646 host intracellular part IEP Predicted GO
CC GO:0033647 host intracellular organelle IEP Predicted GO
CC GO:0033648 host intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0033655 host cell cytoplasm part IEP Predicted GO
MF GO:0034511 U3 snoRNA binding IEP Predicted GO
BP GO:0035821 modification of morphology or physiology of other organism IEP Predicted GO
BP GO:0035915 pore formation in membrane of other organism IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
BP GO:0042273 ribosomal large subunit biogenesis IEP Predicted GO
MF GO:0043023 ribosomal large subunit binding IEP Predicted GO
CC GO:0043230 extracellular organelle IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
CC GO:0043657 host cell IEP Predicted GO
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044161 host cell cytoplasmic vesicle IEP Predicted GO
CC GO:0044216 other organism cell IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0044657 pore formation in membrane of other organism during symbiotic interaction IEP Predicted GO
BP GO:0044658 pore formation in membrane of host by symbiont IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
BP GO:0051673 membrane disruption in other organism IEP Predicted GO
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0052025 modification by symbiont of host cell membrane IEP Predicted GO
BP GO:0052043 modification by symbiont of host cellular component IEP Predicted GO
BP GO:0052111 modification by symbiont of host structure IEP Predicted GO
BP GO:0052185 modification of structure of other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0052188 modification of cellular component in other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0052332 modification by organism of membrane in other organism involved in symbiotic interaction IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
CC GO:0065010 extracellular membrane-bounded organelle IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097619 PTEX complex IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 68 137
PlasmoDB PB001161.00.0
PlasmoDB PB300015.00.0
PlasmoDB PBANKA_082480