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  5. PBANKA_0833800

PBANKA_0833800


Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF15861: Partial cleavage stimulation factor domain, PF14327: Hinge domain of cleavage stimulation factor subunit 2, PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).


Gene families : OG_01_0000148 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0833800
Cluster P. berghei: Cluster_3


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
CC GO:0005634 nucleus ISO PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0004438 phosphatidylinositol-3-phosphatase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0030904 retromer complex IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP Predicted GO
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP Predicted GO
MF GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
MF GO:0043812 phosphatidylinositol-4-phosphate phosphatase activity IEP Predicted GO
MF GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
BP GO:0046839 phospholipid dephosphorylation IEP Predicted GO
BP GO:0046856 phosphatidylinositol dephosphorylation IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0052744 phosphatidylinositol monophosphate phosphatase activity IEP Predicted GO
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR031721 Partial_CstF 663 722
IPR025742 CSTF2_hinge 203 265
IPR000504 RRM_dom 9 79
PlasmoDB PB000009.02.0
PlasmoDB PB000656.00.0
PlasmoDB PBANKA_083380