PBANKA_0900600

Description : No superfamily available. Pfam domain(s): PF06022: Plasmodium variant antigen protein Cir/Yir/Bir.

Gene families : OG_01_0000000 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pbe RNA-seq: PBANKA_0900600
Cluster	P. berghei: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
PBANKA_0837081	No alias	No superfamily available. Pfam domain(s): PF06022:...	0.1	Orthofinderv1.1.8
PBANKA_0837121	No alias	No superfamily available. Pfam domain(s): PF06022:...	0.08	Orthofinderv1.1.8
PBANKA_1246981	No alias	No superfamily available. Pfam domain(s): PF06022:...	0.11	Orthofinderv1.1.8

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEP	Predicted GO
BP	GO:0000389	mRNA 3'-splice site recognition	IEP	Predicted GO
CC	GO:0000974	Prp19 complex	IEP	Predicted GO
BP	GO:0006376	mRNA splice site selection	IEP	Predicted GO
CC	GO:0071020	post-spliceosomal complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006477	Yir_bir_cir	6	291

External Links