Aliases : RSA4
Description : SSF50978: WD40-repeat-containing domain superfamily. Pfam domain(s): PF00400: WD domain, G-beta repeat, PF08154: NLE (NUC135) domain.
Gene families : OG_01_0001056 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001056_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pbe RNA-seq: PBANKA_0903000 | |
Cluster | P. berghei: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PF3D7_1146000 | RSA4 | SSF50978: WD40-repeat-containing domain superfamily.... | 0.03 | Orthofinderv1.1.8 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000027 | ribosomal large subunit assembly | ISS | PlasmoDB |
MF | GO:0005515 | protein binding | IEA | Interproscan predictions |
MF | GO:0005515 | protein binding | IEA | PlasmoDB |
CC | GO:0005730 | nucleolus | ISS | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000054 | ribosomal subunit export from nucleus | IEP | Predicted GO |
BP | GO:0000055 | ribosomal large subunit export from nucleus | IEP | Predicted GO |
CC | GO:0000323 | lytic vacuole | IEP | Predicted GO |
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predicted GO |
BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003724 | RNA helicase activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005732 | small nucleolar ribonucleoprotein complex | IEP | Predicted GO |
CC | GO:0005764 | lysosome | IEP | Predicted GO |
CC | GO:0005767 | secondary lysosome | IEP | Predicted GO |
CC | GO:0005773 | vacuole | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
MF | GO:0008479 | queuine tRNA-ribosyltransferase activity | IEP | Predicted GO |
BP | GO:0008616 | queuosine biosynthetic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
CC | GO:0020020 | food vacuole | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
CC | GO:0030139 | endocytic vesicle | IEP | Predicted GO |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predicted GO |
MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0030686 | 90S preribosome | IEP | Predicted GO |
CC | GO:0030687 | preribosome, large subunit precursor | IEP | Predicted GO |
CC | GO:0031428 | box C/D snoRNP complex | IEP | Predicted GO |
BP | GO:0031503 | protein-containing complex localization | IEP | Predicted GO |
CC | GO:0032010 | phagolysosome | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0033750 | ribosome localization | IEP | Predicted GO |
BP | GO:0034462 | small-subunit processome assembly | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
MF | GO:0034511 | U3 snoRNA binding | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042273 | ribosomal large subunit biogenesis | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
CC | GO:0044452 | nucleolar part | IEP | Predicted GO |
CC | GO:0045335 | phagocytic vesicle | IEP | Predicted GO |
BP | GO:0046116 | queuosine metabolic process | IEP | Predicted GO |
BP | GO:0051656 | establishment of organelle localization | IEP | Predicted GO |
CC | GO:0070545 | PeBoW complex | IEP | Predicted GO |
BP | GO:0071426 | ribonucleoprotein complex export from nucleus | IEP | Predicted GO |
BP | GO:0071428 | rRNA-containing ribonucleoprotein complex export from nucleus | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
PlasmoDB | PB001104.03.0 |
PlasmoDB | PBANKA_090310 |