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  5. PBANKA_0921900

PBANKA_0921900


Description : SSF50978: WD40-repeat-containing domain superfamily. Pfam domain(s): No Pfam domain available.


Gene families : OG_01_0001116 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0921900
Cluster P. berghei: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1126500 No alias SSF82171: No description available, SSF50978:... 0.05 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
MF GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEP Predicted GO
MF GO:0003725 double-stranded RNA binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005684 U2-type spliceosomal complex IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Predicted GO
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Predicted GO
BP GO:0018202 peptidyl-histidine modification IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:2000765 regulation of cytoplasmic translation IEP Predicted GO

No InterPro domains available for this sequence

PlasmoDB PB000350.00.0
PlasmoDB PB000355.01.0
PlasmoDB PBANKA_092190