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  5. PBANKA_0938100

PBANKA_0938100


Description : SSF48452: Tetratricopeptide-like helical domain superfamily. Pfam domain(s): No Pfam domain available.


Gene families : OG_01_0001182 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001182_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_0938100
Cluster P. berghei: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1108900 No alias SSF48452: Tetratricopeptide-like helical domain... 0.06 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA PlasmoDB
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
BP GO:0002143 tRNA wobble position uridine thiolation IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004822 isoleucine-tRNA ligase activity IEP Predicted GO
MF GO:0005371 tricarboxylate secondary active transmembrane transporter activity IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
CC GO:0005736 RNA polymerase I complex IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006360 transcription by RNA polymerase I IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006428 isoleucyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006842 tricarboxylic acid transport IEP Predicted GO
BP GO:0006843 mitochondrial citrate transmembrane transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009304 tRNA transcription IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015142 tricarboxylic acid transmembrane transporter activity IEP Predicted GO
BP GO:0015746 citrate transport IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031120 snRNA pseudouridine synthesis IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0035674 tricarboxylic acid transmembrane transport IEP Predicted GO
BP GO:0040031 snRNA modification IEP Predicted GO
BP GO:0042797 tRNA transcription by RNA polymerase III IEP Predicted GO
BP GO:0042891 antibiotic transport IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:0098781 ncRNA transcription IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
BP GO:1990481 mRNA pseudouridine synthesis IEP Predicted GO
BP GO:1990546 mitochondrial tricarboxylic acid transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

PlasmoDB PB000047.03.0
PlasmoDB PB000390.02.0
PlasmoDB PBANKA_093810