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PBANKA_1007200 (RPA1)


Aliases : RPA1

Description : SSF50249: Nucleic acid-binding, OB-fold. Pfam domain(s): PF01336: OB-fold nucleic acid binding domain, PF16900: Replication protein A OB domain, PF08646: Replication factor-A C terminal domain.


Gene families : OG_01_0000319 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1007200
Cluster P. berghei: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
PF3D7_0409600 RPA1 SSF50249: "Nucleic acid-binding, OB-fold". Pfam... 0.06 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005802 trans-Golgi network IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0017134 fibroblast growth factor binding IEP Predicted GO
MF GO:0019838 growth factor binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predicted GO
MF GO:0035650 AP-1 adaptor complex binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044228 host cell surface IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
CC GO:0072546 ER membrane protein complex IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
InterPro domains Description Start Stop
IPR031657 REPA_OB_2 836 931
IPR004365 NA-bd_OB_tRNA 722 799
IPR013955 Rep_factor-A_C 997 1146
PlasmoDB PB001259.02.0
PlasmoDB PB300457.00.0
PlasmoDB PB300839.00.0
PlasmoDB PB402156.00.0
PlasmoDB PBANKA_100720