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  5. PBANKA_1010300

PBANKA_1010300


Description : SSF52540: P-loop containing nucleoside triphosphate hydrolase, SSF53300: von Willebrand factor A-like domain superfamily. Pfam domain(s): PF07728: AAA domain (dynein-related subfamily), PF17867: Midasin AAA lid domain, PF17865: Midasin AAA lid domain.


Gene families : OG_01_0001239 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1010300
Cluster P. berghei: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1434500 No alias SSF52540: P-loop containing nucleoside triphosphate... 0.13 Orthofinderv1.1.8

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan predictions
MF GO:0005524 ATP binding IEA PlasmoDB
MF GO:0016887 ATPase activity IEA Interproscan predictions
MF GO:0016887 ATPase activity IEA PlasmoDB
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006379 mRNA cleavage IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Predicted GO
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Predicted GO
BP GO:0018202 peptidyl-histidine modification IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0050072 m7G(5')pppN diphosphatase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2000765 regulation of cytoplasmic translation IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011704 ATPase_dyneun-rel_AAA 2287 2460
IPR011704 ATPase_dyneun-rel_AAA 1107 1176
IPR011704 ATPase_dyneun-rel_AAA 1521 1659
IPR011704 ATPase_dyneun-rel_AAA 1983 2073
IPR011704 ATPase_dyneun-rel_AAA 501 631
PlasmoDB PB000093.02.0
PlasmoDB PB000135.02.0
PlasmoDB PB000170.03.0
PlasmoDB PB000616.03.0
PlasmoDB PB000759.03.0
PlasmoDB PB000763.01.0
PlasmoDB PB000933.02.0
PlasmoDB PB300376.00.0
PlasmoDB PB300391.00.0
PlasmoDB PB300908.00.0
PlasmoDB PB300925.00.0
PlasmoDB PB301143.00.0
PlasmoDB PBANKA_101030