1. Home
  2. Species
  3. Plasmodium berghei ANKA
  4. Sequence
  5. PBANKA_1023300

PBANKA_1023300 (CPSF4)


Aliases : CPSF4

Description : No superfamily available. Pfam domain(s): PF04146: YT521-B-like domain.


Gene families : OG_01_0001291 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1023300
Cluster P. berghei: Cluster_5


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS PlasmoDB
MF GO:0003723 RNA binding IEA Interproscan predictions
MF GO:0003723 RNA binding IEA PlasmoDB
CC GO:0005634 nucleus ISS PlasmoDB
MF GO:0046872 metal ion binding IEA PlasmoDB
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000014 single-stranded DNA endodeoxyribonuclease activity IEP Predicted GO
CC GO:0000109 nucleotide-excision repair complex IEP Predicted GO
CC GO:0000112 nucleotide-excision repair factor 3 complex IEP Predicted GO
MF GO:0004482 mRNA (guanine-N7-)-methyltransferase activity IEP Predicted GO
MF GO:0004520 endodeoxyribonuclease activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Predicted GO
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006295 nucleotide-excision repair, DNA incision, 3'-to lesion IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
MF GO:0008174 mRNA methyltransferase activity IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0030904 retromer complex IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0032958 inositol phosphate biosynthetic process IEP Predicted GO
BP GO:0033683 nucleotide-excision repair, DNA incision IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
CC GO:0043656 intracellular region of host IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1990391 DNA repair complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007275 YTH_domain 384 515
PlasmoDB PB001316.02.0
PlasmoDB PBANKA_102330