Aliases : SPB4
Description : SSF52540: P-loop containing nucleoside triphosphate hydrolase. Pfam domain(s): PF00271: Helicase conserved C-terminal domain, PF13959: Domain of unknown function (DUF4217), PF00270: DEAD/DEAH box helicase.
Gene families : OG_01_0002797 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0002797_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pbe RNA-seq: PBANKA_1024100 | |
Cluster | P. berghei: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
PF3D7_1419100 | SPB4 | SSF52540: P-loop containing nucleoside triphosphate... | 0.1 | Orthofinderv1.1.8 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000027 | ribosomal large subunit assembly | ISS | PlasmoDB |
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan predictions |
MF | GO:0003676 | nucleic acid binding | IEA | PlasmoDB |
MF | GO:0005524 | ATP binding | IEA | Interproscan predictions |
MF | GO:0005524 | ATP binding | IEA | PlasmoDB |
CC | GO:0030686 | 90S preribosome | ISS | PlasmoDB |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000054 | ribosomal subunit export from nucleus | IEP | Predicted GO |
BP | GO:0000055 | ribosomal large subunit export from nucleus | IEP | Predicted GO |
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predicted GO |
BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predicted GO |
MF | GO:0003724 | RNA helicase activity | IEP | Predicted GO |
CC | GO:0005634 | nucleus | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
CC | GO:0005732 | small nucleolar ribonucleoprotein complex | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
MF | GO:0008479 | queuine tRNA-ribosyltransferase activity | IEP | Predicted GO |
MF | GO:0008525 | phosphatidylcholine transporter activity | IEP | Predicted GO |
MF | GO:0008526 | phosphatidylinositol transporter activity | IEP | Predicted GO |
BP | GO:0008616 | queuosine biosynthetic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
CC | GO:0020005 | symbiont-containing vacuole membrane | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predicted GO |
MF | GO:0030515 | snoRNA binding | IEP | Predicted GO |
CC | GO:0030687 | preribosome, large subunit precursor | IEP | Predicted GO |
CC | GO:0031428 | box C/D snoRNP complex | IEP | Predicted GO |
BP | GO:0031503 | protein-containing complex localization | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
BP | GO:0032784 | regulation of DNA-templated transcription, elongation | IEP | Predicted GO |
BP | GO:0033750 | ribosome localization | IEP | Predicted GO |
BP | GO:0034462 | small-subunit processome assembly | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
MF | GO:0034511 | U3 snoRNA binding | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042273 | ribosomal large subunit biogenesis | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
CC | GO:0044217 | other organism part | IEP | Predicted GO |
CC | GO:0044421 | extracellular region part | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044452 | nucleolar part | IEP | Predicted GO |
BP | GO:0046116 | queuosine metabolic process | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
BP | GO:0051656 | establishment of organelle localization | IEP | Predicted GO |
MF | GO:0071074 | eukaryotic initiation factor eIF2 binding | IEP | Predicted GO |
BP | GO:0071426 | ribonucleoprotein complex export from nucleus | IEP | Predicted GO |
BP | GO:0071428 | rRNA-containing ribonucleoprotein complex export from nucleus | IEP | Predicted GO |
CC | GO:0097619 | PTEX complex | IEP | Predicted GO |
PlasmoDB | PB000428.03.0 |
PlasmoDB | PB001045.03.0 |
PlasmoDB | PB403480.00.0 |
PlasmoDB | PBANKA_102410 |