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  5. PBANKA_1025500

PBANKA_1025500


Description : No superfamily available. Pfam domain(s): PF04054: CCR4-Not complex component, Not1, PF12842: Domain of unknown function (DUF3819).


Gene families : OG_01_0000126 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1025500
Cluster P. berghei: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
PF3D7_1103800 NOT1 No superfamily available. Pfam domain(s): PF12842:... 0.03 Orthofinderv1.1.8
PF3D7_1417200 No alias No superfamily available. Pfam domain(s): PF04054:... 0.18 Orthofinderv1.1.8

Type GO Term Name Evidence Source
CC GO:0030014 CCR4-NOT complex ISM PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0032958 inositol phosphate biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046839 phospholipid dephosphorylation IEP Predicted GO
BP GO:0046856 phosphatidylinositol dephosphorylation IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007196 CCR4-Not_Not1_C 3987 4161
IPR007196 CCR4-Not_Not1_C 3688 3924
IPR024557 CCR4-Not_Not1su_DUF3819 1998 2141
PlasmoDB PB000517.00.0
PlasmoDB PB000726.00.0
PlasmoDB PB102600.00.0
PlasmoDB PB301048.00.0
PlasmoDB PB301569.00.0
PlasmoDB PBANKA_102550