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  5. PBANKA_1100821

PBANKA_1100821


Description : SSF55961: 20-02-2019. Pfam domain(s): No Pfam domain available.


Gene families : OG_01_0000005 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1100821

Target Alias Description ECC score Gene Family Method Actions
PBANKA_0000901 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.2 Orthofinderv1.1.8
PBANKA_0001200 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.17 Orthofinderv1.1.8
PBANKA_0008101 No alias SSF55961: 20-02-2019. Pfam domain(s): No Pfam domain available. 0.02 Orthofinderv1.1.8
PBANKA_0112701 No alias SSF55961: 20-02-2019. Pfam domain(s): No Pfam domain available. 0.02 Orthofinderv1.1.8
PBANKA_0112721 No alias SSF55961: 20-02-2019. Pfam domain(s): PF07418: Acidic... 0.2 Orthofinderv1.1.8
PBANKA_0700500 No alias SSF55961: 20-02-2019. Pfam domain(s): PF07418: Acidic... 0.29 Orthofinderv1.1.8
PBANKA_0800200 No alias SSF55961: 20-02-2019. Pfam domain(s): PF07418: Acidic... 0.12 Orthofinderv1.1.8
PBANKA_0836800 EMAP1 SSF55961: 20-02-2019. Pfam domain(s): No Pfam domain available. 0.07 Orthofinderv1.1.8
PBANKA_0837201 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.11 Orthofinderv1.1.8
PBANKA_1040151 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.1 Orthofinderv1.1.8
PBANKA_1100900 No alias SSF55961: 20-02-2019. Pfam domain(s): No Pfam domain available. 0.02 Orthofinderv1.1.8
PBANKA_1200051 No alias SSF55961: 20-02-2019. Pfam domain(s): No Pfam domain available. 0.18 Orthofinderv1.1.8
PBANKA_1200091 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.33 Orthofinderv1.1.8
PBANKA_1246141 No alias SSF55961: 20-02-2019. Pfam domain(s): No Pfam domain available. 0.02 Orthofinderv1.1.8
PBANKA_1246161 No alias SSF55961: 20-02-2019. Pfam domain(s): PF07418: Acidic... 0.02 Orthofinderv1.1.8
PBANKA_1246941 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.17 Orthofinderv1.1.8
PBANKA_1300051 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.17 Orthofinderv1.1.8
PBANKA_1327300 No alias SSF55961: 20-02-2019. Pfam domain(s): No Pfam domain available. 0.02 Orthofinderv1.1.8
PBANKA_1365600 No alias SSF55961: 20-02-2019. Pfam domain(s): PF07418: Acidic... 0.04 Orthofinderv1.1.8
PBANKA_1465700 No alias SSF55961: 20-02-2019. Pfam domain(s): PF07418: Acidic... 0.14 Orthofinderv1.1.8
PBANKA_1466141 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.25 Orthofinderv1.1.8
PBANKA_1466221 No alias No superfamily available. Pfam domain(s): No Pfam domain... 0.17 Orthofinderv1.1.8

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!