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PBANKA_1103000 (SRSF12)


Aliases : SRSF12

Description : SSF54928: RNA-binding domain superfamily. Pfam domain(s): PF00076: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).


Gene families : OG_01_0000101 (Orthofinderv1.1.8) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pbe RNA-seq: PBANKA_1103000
Cluster P. berghei: Cluster_1


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan predictions
MF GO:0003676 nucleic acid binding IEA PlasmoDB
CC GO:0005634 nucleus ISO PlasmoDB
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008169 C-methyltransferase activity IEP Predicted GO
MF GO:0008525 phosphatidylcholine transporter activity IEP Predicted GO
BP GO:0009266 response to temperature stimulus IEP Predicted GO
MF GO:0009383 rRNA (cytosine-C5-)-methyltransferase activity IEP Predicted GO
BP GO:0009408 response to heat IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016434 rRNA (cytosine) methyltransferase activity IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
CC GO:0020002 host cell plasma membrane IEP Predicted GO
CC GO:0020003 symbiont-containing vacuole IEP Predicted GO
CC GO:0020007 apical complex IEP Predicted GO
CC GO:0020026 merozoite dense granule IEP Predicted GO
CC GO:0030430 host cell cytoplasm IEP Predicted GO
MF GO:0030544 Hsp70 protein binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0031410 cytoplasmic vesicle IEP Predicted GO
CC GO:0031982 vesicle IEP Predicted GO
CC GO:0033643 host cell part IEP Predicted GO
CC GO:0033646 host intracellular part IEP Predicted GO
CC GO:0033655 host cell cytoplasm part IEP Predicted GO
MF GO:0033677 DNA/RNA helicase activity IEP Predicted GO
MF GO:0033678 5'-3' DNA/RNA helicase activity IEP Predicted GO
MF GO:0033679 3'-5' DNA/RNA helicase activity IEP Predicted GO
BP GO:0042000 translocation of peptides or proteins into host IEP Predicted GO
MF GO:0043142 single-stranded DNA-dependent ATPase activity IEP Predicted GO
CC GO:0043230 extracellular organelle IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
CC GO:0043657 host cell IEP Predicted GO
BP GO:0044053 translocation of peptides or proteins into host cell cytoplasm IEP Predicted GO
CC GO:0044216 other organism cell IEP Predicted GO
CC GO:0044217 other organism part IEP Predicted GO
BP GO:0044417 translocation of molecules into host IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0044766 multi-organism transport IEP Predicted GO
BP GO:0051808 translocation of peptides or proteins into other organism involved in symbiotic interaction IEP Predicted GO
BP GO:0051836 translocation of molecules into other organism involved in symbiotic interaction IEP Predicted GO
CC GO:0065010 extracellular membrane-bounded organelle IEP Predicted GO
BP GO:0080009 mRNA methylation IEP Predicted GO
CC GO:0097619 PTEX complex IEP Predicted GO
CC GO:0097708 intracellular vesicle IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
BP GO:1902579 multi-organism localization IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 14 83
PlasmoDB PB000414.01.0
PlasmoDB PBANKA_110300